The sanding to “feather” the edge is only needed for the 2 top layers because it is so thick. After the top 2 sheets and the side sheets have received their wet out coats you will do 2 “fill” coats.
Do Not Sand Before The 2 Fill Coats.
You will only need to sand After the 2 fill coats prior to the last (3rd) coat. This is the sanding step that will smooth out any bumps or ridge caused by the side glass overlapping on the top 2 fiberglass sheets which should be minimal.
After your 3rd and final coat you can rest easy, the hard parts are done for a while. Hope this clears up any confusion.